Return to main results Retrieve Phyre Job Id

Job DescriptionP77395
Confidence98.75%DateThu Jan 5 12:28:31 GMT 2012
Rank212Aligned Residues165
% Identity14%Templatec2uy1A_
PDB info PDB header:rna-binding proteinChain: A: PDB Molecule:cleavage stimulation factor 77; PDBTitle: crystal structure of cstf-77
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180
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Query Sequence  PREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD. . . . . . . . . .
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Template Sequence  ARLIDLEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEMSDGMFLSLYYGLV
Template Known Secondary structure  T
TT


TTT
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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
   181........190.........200.........210.........220.........230.........240.
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Query Sequence  . . . . . . . . . . . . . . . . . . . TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFG
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Template Sequence  MDEEAVYGDLKRKYSFSKELDLLRINHLNYVLKKRGLELFRKLFIELGNEGVGPHVFIYCAFIEYYATGSRATPYNIFSS
Template Known Secondary structure  TT
TT


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S
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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   242.......250.........260.........270.......
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Query Sequence  HLRKDLTAADGQTRKTFQEILAALGTGDALASKYRR
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Template Sequence  GLLKHPD. . STLLKEEFFLFLLRIGDEENARALFKR
Template Known Secondary structure 
TT..
T
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   346...350.. .......360.........370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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