Job Description P77395 Confidence 97.75% Date Thu Jan 5 12:28:31 GMT 2012 Rank 299 Aligned Residues 89 % Identity 24% Template c2k6vA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus Resolution UNK

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.																													.	.
Predicted Secondary structure																		.																			.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																			.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	T	P	V	L	F	Y	F	W	S	E	R	S	Q	H	.	C	L	Q	L	T	P	I	L	E	S	L	A	A	Q	Y	N	G	Q	.	.	.	.	F	I	L	A	K	L	D	C	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M
Query Conservation																		.																			.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																			.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	K	V	V	L	L	F	F	G	F	T	R	C	P	D	V	C	P	T	T	L	L	A	L	K	R	A	Y	E	K	L	P	P	K	A	Q	E	R	V	Q	V	I	F	V	S	V	D	P	E	R	D	P	P	E	V	A	D	R	Y	A	K	A	F	H	P	S	F	L	G	L	S	G	S	P	E	A	V	R	E
Template Known Secondary structure		T	T	S									T	T		S	S														T	T	S						T	T								S		T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		69	70	.	.	.	.	.	.	.	.	.																80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		I	A	A	Q	F	G	L	R	A	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	Y	L	F	Q	N	G	Q	P	V	D	G	F	Q	G	P	.	.	Q	P	E	E	A	I	R	A	L	L	D	K	V	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		A	A	Q	T	F	G	V	F	Y	Q	K	S	Q	Y	R	G	P	G	E	Y	L	V	D	H	T	A	T	T	F	V	V	K	E	G	R	L	V	L	L	Y	S	P	D	K	A	E	A	T	D	R	V	V	A	D	L	Q	A	L	L
Template Known Secondary structure							T											T	T															T	T												T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions