Return to main results Retrieve Phyre Job Id

Job DescriptionP77395
Confidence99.81%DateThu Jan 5 12:28:31 GMT 2012
Rank68Aligned Residues101
% Identity26%Templatec2i9hA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin i; PDBTitle: nmr solution structure of the reduced form of thioredoxin 12 from yeast (trx1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6... 10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 
.
























Query SS confidence 



.










































































Query Sequence  IVNI. NESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLF
Query Conservation 
   .    
      
    
 
 
 
  
  
                      

            
   
     
Alig confidence 



.










..































.




























Template Conservation 
  
 
   
   
  ..    

 
 
 

  
                .     
       
     
   

    
Template Sequence  VTQFKTASEFDSAIAQ. . DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ. ADFYKLDVDELGDVAQKNEVSAMPTLLLF
Template Known Secondary structure 
B

SSTT..SS


SS
STTSTGGGT
TT.S

BB

TTTSTT

SSS
Template Predicted Secondary structure 



..


















.








Template SS confidence 















































































   2.......10....... ..20.........30.........40......... 50.........60.........70........
 
   85....90.........100.........110
Predicted Secondary structure 












Query SS confidence 

























Query Sequence  QNGQPVDGFQGPQPEEAIRALLDKVL
Query Conservation    
       
      
   
    
Alig confidence 










.













Template Conservation    
  
    
.     
   
   
Template Sequence  KNGKEVAKVVG. ANPAAIKQAIAANA
Template Known Secondary structure  TTS


S
.

TTTTTTTTTTT
Template Predicted Secondary structure 


.



Template SS confidence 

























   7980......... 90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions