Job Description P77395 Confidence 97.15% Date Thu Jan 5 12:28:31 GMT 2012 Rank 352 Aligned Residues 95 % Identity 15% Template c1zofB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Resolution 2.95 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.																													.	.	.	.	.	.	70
Predicted Secondary structure																																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	M	T	T	P	V	L	F	Y	F	W	S	E	R	S	Q	H	C	L	Q	L	T	P	I	L	E	S	L	A	A	Q	Y	N	G	Q	.	F	I	L	A	K	L	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	Q	M	I	A
Query Conservation																																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	K	N	G	V	I	L	F	F	W	P	K	D	F	T	F	V	C	P	T	E	I	I	A	F	D	K	R	V	K	D	F	H	E	K	G	F	N	V	I	G	V	S	I	D	S	E	Q	V	H	F	A	W	K	N	T	P	V	E	K	G	G	I	G	Q	V	S	F	P	M	V	A	D	I	T	K	S	I	S
Template Known Secondary structure				S	S								S		S	S		S	S																		T	T								S	S											S		G	G	G	T						S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		71	.	.	.	.	.						.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure								.	.	.	.	.									.																.	.	.	.
Query SS confidence								.	.	.	.	.									.																.	.	.	.
Query Sequence		A	Q	F	G	L	R	.	.	.	.	.	A	I	P	T	V	Y	L	F	.	Q	N	G	Q	P	V	D	G	F	Q	G	P	Q	P	E	.	.	.	.	E	A	I	R	A	L	L	D	K	V	L	P	R	E	E
Query Conservation								.	.	.	.	.									.																.	.	.	.
Alig confidence								.	.	.	.	.									.																.	.	.	.
Template Conservation
Template Sequence		R	D	Y	D	V	L	F	E	E	A	I	A	L	R	G	A	F	L	I	D	K	N	M	K	V	R	H	A	V	I	N	D	L	P	L	G	R	N	A	D	E	M	L	R	M	V	D	A	L	L	H	F	E	E
Template Known Secondary structure				T	T				T	T	T											T	T	S	B									S	S			T																	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions