Job Description P77395 Confidence 74.98% Date Thu Jan 5 12:28:31 GMT 2012 Rank 415 Aligned Residues 66 % Identity 11% Template c1yy7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: crystal structure of stringent starvation protein a (sspa),2 an rna polymerase-associated transcription factor Resolution 2.02 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	M	T	T	P	V	L	F	Y	F	W	S	E	R	S	Q	H	C	L	Q	L	T	P	I	L	E	S	L	A	A	Q	Y	N	G	Q	F	I	L	A	K	L	D	C	D	A	E	Q	M	I	A	A	Q	F	G	L	R	A	I	P	T	V	Y	L	F	Q	N	G	Q	P
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		A	A	N	K	R	S	V	M	T	L	F	S	G	P	T	D	I	F	S	H	Q	V	R	I	V	L	.	.	.	.	A	E	K	G	V	S	V	E	I	E	Q	V	E	A	D	N	L	P	Q	D	L	I	D	L	N	P	Y	R	T	V	P	T	L	V	D	R	E	L	T	L
Template Known Secondary structure			G	G	G	S	S	S							T	T												.	.	.	.				T										T	T	S										T	T			S	S					T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions