 |
Job Description | Q46943 | Confidence | 2.27% | Date | Thu Jan 5 12:36:04 GMT 2012 |
Rank | 52 | Aligned Residues | 33 |
% Identity | 9% | Template | c3ju0A_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:phage integrase; |
PDBTitle: structure of the arm-type binding domain of hai7 integrase
|
Resolution | 1.60 Å |
|
  |   |
116 | . | . | . | 120 | . | . | . | . | |
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | R | L | A | Q | L | I | P | . |
. |
. |
D | F | Y | V | F | P | E | K | S | V | S | Y | N | I | L | K | Q | G | K | H | A | F | I | L |
Query Conservation |   |
|   |   |   |   |   |
|   |
| . | . | . |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |
Template Sequence |   |
D | S | K | V | K | N | A | K | S | L | E | K | E | Y | K | L | T | D | G | F | G | M | H | L | L | V | H | P | N | G | S | K | Y | W | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| S | S |
|  |  |  |  |  |  | T | T |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|