 |
Job Description | Q46943 | Confidence | 2.84% | Date | Thu Jan 5 12:36:04 GMT 2012 |
Rank | 35 | Aligned Residues | 35 |
% Identity | 17% | Template | c3a0cA_ |
PDB info |
PDB header:sugar binding protein | Chain: A: PDB Molecule:mannose/sialic acid-binding lectin; |
PDBTitle: crystal structure of an anti-hiv mannose-binding lectin from2 polygonatum cyrtonema hua
|
Resolution | 2.00 Å |
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | L | I | P | D | F | Y | V | F | P | E | K | S | V | S | Y | N | I | L | K | Q | G | K | H | A | F | I | L | S | I | G | N | R | A | I | M |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   | . | . |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
N | S | L | F | T | G | H | S | L | E | V | G | P | S | Y | R | L | I | M | . |
. |
Q | G | D | C | N | F | V | L | Y | D | S | G | K | P | V | W |
Template Known Secondary structure |   |
|  |  |
| T | T |
|  |  |  |  | T | T | T |  |  |  |  |  | . | . |
| T | T | S |
|  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|