Job Description Q46943 Confidence 10.64% Date Thu Jan 5 12:36:04 GMT 2012 Rank 5 Aligned Residues 69 % Identity 14% Template c1cidA_ PDB info PDB header:t-cell surface glycoprotein Chain: A: PDB Molecule:t cell surface glycoprotein cd4; PDBTitle: crystal structure of domains 3 & 4 of rat cd4 and their2 relationship to the nh2-terminal domains Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	F	N	D	Q	G	R	A	N	L	T	I	D	F	M	Y	N	K	K	N	K	T	G	T	V	A	L	S	G	T	W	Q	Q	G	N	R	E	S	K	S	I	R	R	N	I	E	Y	T	W	I	E	N	Y	D	T	A	H	L	T	S	K	K	V	N	K	F	E	I	M	D	Q	V	D
Query Conservation
Alig confidence																						.					.	.	.																							.
Template Conservation																						.					.	.	.																							.
Template Sequence		I	T	A	Y	K	S	E	G	E	S	A	E	F	S	F	P	L	N	L	G	.	E	E	S	L	.	.	.	Q	G	E	L	R	W	K	A	E	K	A	P	S	S	Q	S	W	I	T	F	S	L	.	K	N	Q	K	V	S	V	Q	K	S	T	S	N	P	K	F	Q	L	S	E	T	L	P
Template Known Secondary structure								T	T	S											S	.	S				.	.	.									S	S				S									.		T	T						S				S	S						S	B	T	T
Template Predicted Secondary structure																						.					.	.	.																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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