 |
Job Description | P0A700 | Confidence | 83.08% | Date | Thu Jan 5 11:04:19 GMT 2012 |
Rank | 37 | Aligned Residues | 61 |
% Identity | 10% | Template | c2vl6C_ |
PDB info |
PDB header:dna binding protein | Chain: C: PDB Molecule:minichromosome maintenance protein mcm; |
PDBTitle: structural analysis of the sulfolobus solfataricus mcm2 protein n-terminal domain
|
Resolution | 2.8 Å |
|
 |
  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | S | V | A | E | G | C | K | L | H | L | E | E | Q | E | A | E | C | W | C | E | T | C | Q | Q | Y | V | T | L | L | T | Q | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | R | R | C | P | Q | C | H | G | D | . |
M | L | Q | I | V | A | D | D | G | L | Q | I | R | R | I | E | I |
Query Conservation |   |
  |   |
|   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|
|   | . |   |   |   |
|   |   |
|   |
|
|   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
D | G | I | L | V | K | V | T | P | V | K | E | R | I | Y | K | A | T | Y | K | H | I | H | P | D | C | M | Q | E | F | E | W | P | E | D | E | E | M | P | E | V | L | E | M | P | T | I | C | P | K | C | G | K | P | G | Q | F | R | L | I | P | E | K | T | K | L | I | D | W | Q | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
| T | T |
|
|
|  |  |  | S | S | T | T | S |
|
|
| T | T |
|
|
|
| S | B |
| T | T | T |
|
| B |
|  |  |  |  |
| G | G | G |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|