 |
Job Description | P0A700 | Confidence | 68.04% | Date | Thu Jan 5 11:04:19 GMT 2012 |
Rank | 67 | Aligned Residues | 34 |
% Identity | 9% | Template | c2ktvA_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:eukaryotic peptide chain release factor subunit 1; |
PDBTitle: human erf1 c-domain, "open" conformer
|
Resolution | UNK |
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | A | E | C | W | C | E | T | C | Q | Q | Y | . |
. |
. |
. |
. |
. |
. |
V | T | L | L | T | Q | R | V | R | R | C | P | Q | C | H | G | D | M | L | Q | I |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
M | R | Y | V | L | H | C | Q | G | T | E | E | E | K | I | L | Y | L | T | P | E | Q | E | K | D | K | S | H | F | T | D | K | E | T | G | Q | E | H | E | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |
| S |
|
|  |  |  |  |  |
|  |  |  |  |  |  |
| T | T | T | S |
| T | T | T |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|