Job Description P21517 Confidence 91.12% Date Thu Jan 5 11:38:27 GMT 2012 Rank 271 Aligned Residues 239 % Identity 17% Template d1uasa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.50

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		D	L	D	G	I	S	E	K	L	P	Y	L	K	K	.	.	.	.	.	L	G	V	T	A	L	Y	L	N	P	V	F	K	A	P	S	V	H	K	Y	D	T	E	D	Y	R	H	V	D	P	Q	F	G	G	D	G	A	L	L	R	L	R	H	N	T	Q	Q	L	G	M	R	L	V	L	D	G	V	F	N	H	S
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																					.	.													.	.																							.	.	.
Template Conservation																																									.	.													.	.																							.	.	.
Template Sequence		N	E	Q	I	I	R	E	T	A	D	A	L	V	N	T	G	L	A	K	L	G	Y	Q	Y	V	N	I	D	D	C	W	A	E	Y	S	R	D	S	Q	.	.	G	N	F	V	P	N	R	Q	T	F	P	S	.	.	G	I	K	A	L	A	D	Y	V	H	A	K	G	L	K	L	G	I	Y	S	D	A	.	.	.
Template Known Secondary structure																T	S					T								S	S		B		S	S			T	T	.	.	S				B		T	T	T		T	T	.	.												T	T									S	.	.	.
Template Predicted Secondary structure																																									.	.													.	.																							.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	S	H	A	W	F	D	R	H	N	R	G	T	G	G	A	C	H	N	P	E	S	P	W	R	D	W	Y	S	F	S	D	D	G	T	A	L	D	W	L	G	Y	A	S	L	P	K	L	D	Y	Q	S	E	S	L	V	N	E	I	Y	R	G	E	D	S	I	V	R	H	W	L	K	A	P	W	N	M	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	Q	T	C	S	N	K	M	P	G	S	L	D	H	E	E	Q	D	V	K	T	F	A	.	.	.	.	.	.	S	W	G	V	D	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S	S	S	B			T	T											.	.	.	.	.	.			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
																																														97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	L	D	V	V	H	M	L	G	E	A	G	G	A	R	N	N	M	Q	H	V	A	G	I	T	E	A	A	K	E	T	Q	P	E	A	Y	I	V	G	E	H	F	G	D	A	R	Q	W	L	Q	A	D	V	E	D	A	A	M	N	Y	R	G	F	T	F	P	L	W	G	F	L	A	N	T	D	I	S	Y	D
Query Conservation
Alig confidence															.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Y	D	N	C	N	D	A	G	R	S	V	.	.	.	.	.	M	E	R	Y	T	R	M	S	N	A	M	K	T	Y	G	K	N	I	F	F	S	L	C	E	W	G	K	E	N	P	A	T	W	A	G	R	M	G	N	S	W	R	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T				.	.	.	.	.																T	T	S						S	T	T	T	T		G	G	G	T	G	G	G	T		S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Q	I	D	A	Q	T	C	M	A	W	M	D	N	Y	R	A	G	L	S	H	Q	Q	Q	L	R	M	F	N	Q	L	D	S	H	D	T	A	R	F	K	T	L	L	G	R	D	I	A	R	L	P	L	A	V	V	W	L	F	T	W	P	G	V	P	C	I	Y	Y	G	D	E	V	G	L	D	G	K	N	D
Query Conservation
Alig confidence		.																																								.	.																		.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation		.																																								.	.																		.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		.	D	I	A	D	N	W	G	S	M	T	S	R	A	D	E	N	D	Q	W	A	A	Y	A	G	P	G	G	W	N	D	P	D	M	L	E	V	G	N	G	.	.	G	M	S	E	A	E	Y	R	S	H	F	S	I	W	A	L	A	.	.	.	K	A	P	L	L	I	G	C	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.				S	S													T	T	G	G	G		B	T	T	B									T	T	S	S	.	.	S	S															T	.	.	.	T							S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																								.	.																		.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
			185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.			.	.	.	.	.	520
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		P	F	C	R	K	P	F	P	W	Q	V	E	K	Q	D	T	A	L	F	A	L	Y	.	.	Q	R	M	I	A	L
Query Conservation																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	R	S	M	S	Q	Q	T	K	N	I	L	S	N	S	E	V	I	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions