Job Description P52125 Confidence 10.19% Date Thu Jan 5 12:05:28 GMT 2012 Rank 8 Aligned Residues 85 % Identity 11% Template d1m55a_ SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like Replication protein Rep, nuclease domain Resolution 1.40

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		W	P	D	S	R	H	S	T	L	R	Y	A	W	V	R	E	Y	T	K	N	R	K	R	H	Y	H	L	I	L	C	F	N	Q	D	A	Y	Y	H	L	G	D	Y	D	L	N	R	N	T	L	R	T	M	I	T	T	A	W	Y	S	A	L	.	.	G	I	P	I	D	S	S	G	K	L	V	N	Y	P	P	N	G
Query Conservation																																																															.	.
Alig confidence																					.													.	.	.	.	.	.	.																							.	.
Template Conservation																					.													.	.	.	.	.	.	.
Template Sequence		W	N	K	F	S	K	Q	E	S	K	F	F	V	Q	F	E	K	G	S	.	E	Y	F	H	L	H	T	L	V	E	T	S	.	.	.	.	.	.	.	G	I	S	S	M	V	L	G	R	Y	V	S	Q	I	R	A	Q	L	V	K	V	V	F	Q	G	I	E	P	Q	I	N	D	W	V	A	I	T	K	V	K	K
Template Known Secondary structure							T	S												S	.	S											T	.	.	.	.	.	.	.	T																					T	S	T	T					S	T	T	S					B	S	S	T
Template Predicted Secondary structure																					.													.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	L	L	N	R	K	R	D	N	F	E	Q	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	A	N	K	V	V	D	S	G	Y	I	P	A	Y
Template Known Secondary structure		T	S		B					T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions