Job Description P52125 Confidence 74.06% Date Thu Jan 5 12:05:28 GMT 2012 Rank 1 Aligned Residues 61 % Identity 16% Template d1l5ia_ SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like DNA-binding domain of REP protein Resolution UNK

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	M	I	L	R	V	D	L	H	D	P	I	D	T	E	N	M	D	N	P	F	F	Q	P	R	V	D	S	G	A	I	S	R	F	T	S	A	L	K	A	K	L	K	H	D	K	H	I	K	T	Q	R	K	D	W	P	D	S	R	H	S	T	L	R	Y	A	W	V	R	E	Y	T	K	N	R	K	R	H	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	K	A	K	N	Y	F	L	T	Y	P	K	C	D	.	.	.	.	.	.	.	.	.	.	.	L	T	K	E	N	A	L	S	Q	I	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	T	P	T	N	K	L	F	I	K	I	C	R	E	L	H	E	N	G	E	P	H	L
Template Known Secondary structure													T	T			.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S													T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.												.	.	.	.	.	.	.	30	.	.	.	.																			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	L	C	F	N	Q	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	L	I	Q	F	E	G	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions