Job Description P52125 Confidence 3.92% Date Thu Jan 5 12:05:28 GMT 2012 Rank 38 Aligned Residues 82 % Identity 12% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		K	R	H	Y	H	L	I	L	C	F	N	Q	D	A	Y	Y	H	L	G	D	Y	D	L	N	R	N	T	L	R	T	M	I	T	T	A	W	Y	.	.	.	.	.	S	A	L	G	I	P	I	D	S	S	G	K	L	V	N	Y	P	P	N	G	K	Y	L	L	N	R	K	R	D	N	F	E	Q	T	Y	S	D	L
Query Conservation																																							.	.	.	.	.
Alig confidence																														.	.	.							.	.	.	.	.
Template Conservation																														.	.	.
Template Sequence		R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y	S	A	A	E	F	R	A	D	A	L	A	A	.	.	.	M	A	K	A	T	A	R	G	R	I	P	L	L	V	G	G	T	M	L	Y	Y	K	A	L	L	E	G	L	P	Y	T	V	A	Q	L	A	I	A	P	E	Q	R	Q	V	L	H	A	R	I
Template Known Secondary structure			S				S	S	S		B		T	T	S															.	.	.							T	T								S														S										S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	R	V	D	Y	M	T	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	R	F	R	Q	M	L	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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