Job Description P42589 Confidence 99.95% Date Thu Jan 5 12:01:36 GMT 2012 Rank 10 Aligned Residues 108 % Identity 19% Template c3bu2B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:putative trna-binding protein; PDBTitle: crystal structure of a trna-binding protein from2 staphylococcus saprophyticus subsp. saprophyticus.3 northeast structural genomics consortium target syr77 Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		T	V	A	Y	A	D	F	A	R	L	E	M	R	V	G	K	I	V	E	V	K	R	H	E	N	A	D	K	L	Y	I	V	Q	V	D	V	G	Q	K	T	L	Q	T	V	T	S	L	V	P	Y	Y	S	.	.	.	.	E	E	E	L	M	G	K	T	V	V	V	L	C	N	L	Q	K	A	K	M	R	G	E	T
Query Conservation																																																						.	.	.	.
Alig confidence																																																						.	.	.	.
Template Conservation
Template Sequence		T	Y	K	L	D	A	D	F	T	P	K	F	V	V	G	Y	V	E	T	K	D	K	H	P	D	A	D	K	L	S	V	L	S	V	D	V	A	T	E	K	L	Q	I	V	C	G	A	P	N	V	E	A	G	Q	K	V	V	V	A	K	V	G	A	V	X	P	S	G	X	V	I	K	D	A	E	L	R	G	V	A
Template Known Secondary structure										S		S													T	T	T	S	S									S	S										T	T			T	T								T	T		B		T	T	S		B							T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		79	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		S	E	C	M	L	L	C	A	E	T	D	D	G	.	.	.	.	S	E	S	V	L	L	T	P	E	R	M	M	P	A	G	V	R	V	V
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		S	S	G	X	I	C	S	X	K	E	L	G	L	P	N	A	P	Q	E	K	G	I	X	V	L	S	D	D	Y	T	V	G	Q	S	F	F
Template Known Secondary structure				S					T	T	T	T	T		S	S			S			S						T	T	S		T	T	S	B	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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