Job Description P42589 Confidence 2.41% Date Thu Jan 5 12:01:36 GMT 2012 Rank 43 Aligned Residues 89 % Identity 16% Template c2zkrk_ PDB info PDB header:ribosomal protein/rna Chain: K: PDB Molecule:rna expansion segment es19; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		M	R	V	G	K	I	V	E	V	K	R	H	E	N	A	D	K	L	Y	I	V	Q	V	D	V	G	Q	K	T	L	Q	T	V	T	S	L	V	P	Y	Y	S	E	E	E	L	M	G	K	T	V	V	V	L	C	N	L	Q	K	A	K	M	R	G	E	T	S	E	C	M	L	L	C	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		L	P	V	G	A	V	I	N	C	A	D	N	T	G	A	K	N	L	Y	I	I	S	V	K	G	I	K	G	R	L	.	.	.	.	.	.	.	.	N	R	L	P	A	A	G	V	G	D	M	V	M	A	T	V	K	K	G	K	P	E	L	R	K	K	V	H	P	A	V	V	I	R	Q	R	K	S	Y	R	R	K
Template Known Secondary structure				T	T							B	S	S	S										T	T					T	.	.	.	.	.	.	.	.	T							T	T												T	T	T	T	T											S	S					T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	E	T	D	D	G	S	E	S	V	L	L	T	P	E	R	M	M	P	A	G	V	R	V	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	G	V	F	L	Y	F	E	D	N	A	G	V	I	V	N	N	K	G	E	M	K	G	S	A	I	T
Template Known Secondary structure		T	S						S	S						B		T	T	S		B	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions