|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | |
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  | . |  |  |  |
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| . | . |
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|  |  |  |  |  |  |  |  |
|  |  |  |
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|  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
T | V | A | Y | A | D | F | A | R | L | E | M | R | V | G | K | I | V | E | V | K | R | H | E | N | A | D | K | L | Y | I | V | . |
Q | V | D | V | G | Q | . |
. |
K | T | L | Q | T | V | T | S | L | V | P | Y | Y | S | E | E | E | L | M | G | K | T | V | V | V | L | C | N | L | Q | K | A | K | M | R | G | E | T | S |
Query Conservation |   |
  |
|   |   |   |
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|   |
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|   |
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|   |   |
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|   |
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|   |
|   | . |   |
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|   |
|   | . | . |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |   |   |   |
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Alig confidence |   |
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| . |
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| . | . |
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Template Conservation |   |
  |
|   |   |   |
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|   |
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|   |
|   |   |
|   |   |
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|   |
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|   |   |   |   |   |
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|   |
|   |   |   |   |   |   |   |
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|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
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|   |
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|   |
|
Template Sequence |   |
E | I | S | Y | A | D | F | E | K | V | D | I | R | V | G | T | I | V | E | A | V | P | F | P | E | A | R | K | P | A | I | K | V | K | I | D | F | G | P | E | I | G | I | K | K | S | S | A | Q | I | T | V | H | Y | T | P | E | S | L | V | G | R | Q | V | L | G | V | V | N | F | P | P | R | Q | I | G | P | F | R | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S | S |
|
|  |  |  |  |  |  |
|  |  |  |  |
|  |  |  |  |  |  | S |
| T | T | T |
|
|  |  |  |  | T | T |
|  |  |  |  |  |
|
| S |
|
|  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
|  |  |  |  |
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Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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|  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
E | C | M | L | L | C | A | E | T | D | D | G | S | E | S | V | L | L | T | P | E | R | M | M | P | A | G | V | R | V |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
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|
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|
|
|
|
| . |
|
|
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|
Template Conservation |   |
|
|
|
|
|   |   |   |
|   |   |   | . |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
E | V | L | T | L | G | F | A | D | A | N | G | . |
D | I | V | L | A | A | V | E | R | P | V | P | N | G | E | K | M |
Template Known Secondary structure |   |
|
|  |  |
|  |  |  |
| T | T | S | . |
|  |  |  |
|
|
| S | S |
|
|
| T | T |
| B |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
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|
|
Template SS confidence |   |
|
|
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|
|
|
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  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |