Job Description P77689 Confidence 100.00% Date Thu Jan 5 12:31:40 GMT 2012 Rank 1 Aligned Residues 410 % Identity 100% Template d1vh4a_ SCOP info Single-stranded right-handed beta-helix Stabilizer of iron transporter SufD Stabilizer of iron transporter SufD Resolution 1.75

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	Q	Q	W	H	H	L	F	E	A	E	G	T	K	R	S	P	Q	A	Q	Q	H	L	Q	Q	L	L	R	T	G	L	P	T	R	K	H	E	N	W	K	Y	T	P	L	E	G	L	I	N	S	Q	F	V	S	I	A	G	E	I	S	P	Q	Q	R	D	A	L	A	L	T	L	D	S	V	R	L	V	F
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		N	A	L	Q	Q	W	H	H	L	F	E	A	K	R	.	.	.	S	P	Q	A	Q	Q	H	L	Q	Q	L	L	R	T	G	L	P	T	R	K	H	E	N	W	K	Y	T	P	L	E	G	L	I	N	S	Q	F	V	S	I	A	G	E	I	S	P	Q	Q	R	D	A	L	A	L	T	L	D	S	V	R	L	V	F
Template Known Secondary structure																.	.	.																			T	T	S	T	T		T	T								T	S																							S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G	R	Y	V	P	A	L	S	D	A	T	E	G	S	G	Y	E	V	S	I	N	D	D	R	Q	G	L	P	D	A	I	Q	A	E	V	F	L	H	L	T	E	S	L	A	Q	S	V	T	H	I	A	V	K	R	G	Q	R	P	A	K	P	L	L	L	M	H	I	T	Q	G	V	A	G	E	E	V	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	G	R	Y	V	P	A	L	S	D	A	T	E	G	S	G	Y	E	V	S	I	N	D	D	R	Q	G	L	P	D	A	I	Q	A	E	V	F	L	H	L	T	E	S	L	A	Q	S	V	T	H	I	A	V	K	R	G	Q	R	P	A	K	P	L	L	L	M	H	I	T	Q	G	V	A	G	E	E	V	N	T
Template Known Secondary structure			T	T				G	G	G	S				T	T	S	S							S			T	T					S	S													S									T	T				S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	R	H	H	L	D	L	A	E	G	A	E	A	T	V	I	E	H	F	V	S	L	N	D	A	R	H	F	T	G	A	R	F	T	I	N	V	A	A	N	A	H	L	Q	H	I	K	L	A	F	E	N	P	L	S	H	H	F	A	H	N	D	L	L	L	A	E	D	A	T	A	F	S	H	S	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	Y	R	H	H	L	D	L	A	E	G	A	E	A	T	V	I	E	H	F	V	S	L	N	D	A	R	H	F	T	G	A	R	F	T	I	N	V	A	A	N	A	H	L	Q	H	I	K	L	A	F	E	N	P	L	S	H	H	F	A	H	N	D	L	L	L	A	E	D	A	T	A	F	S	H	S	F	L	L
Template Known Secondary structure												T	T												S	S	S	S														T	T													T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	V	L	R	H	N	T	S	T	Q	L	N	G	E	N	S	T	L	R	I	N	S	L	A	M	P	V	K	N	E	V	C	D	T	R	T	W	L	E	H	N	K	G	F	C	N	S	R	Q	L	H	K	T	I	V	S	D	K	G	R	A	V	F	N	G	L	I	N	V	A	Q	H	A	I	K	T	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	A	V	L	R	H	N	T	S	T	Q	L	N	G	E	N	S	T	L	R	I	N	S	L	A	M	P	V	K	N	E	V	C	D	T	R	T	W	L	E	H	N	K	G	F	C	N	S	R	Q	L	H	K	T	I	V	S	D	K	G	R	A	V	F	N	G	L	I	N	V	A	Q	H	A	I	K	T	D	G
Template Known Secondary structure				S												S	T	T													T	T													S	S	S													T	T													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	T	N	N	N	L	L	M	G	K	L	A	E	V	D	T	K	P	Q	L	E	I	Y	A	D	D	V	K	C	S	H	G	A	T	V	G	R	I	D	D	E	Q	I	F	Y	L	R	S	R	G	I	N	Q	Q	D	A	Q	Q	M	I	I	Y	A	F	A	A	E	L	T	E	A	L	R	D	E	G	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	T	N	N	N	L	L	M	G	K	L	A	E	V	D	T	K	P	Q	L	E	I	Y	A	D	D	V	K	C	S	H	G	A	T	V	G	R	I	D	D	E	Q	I	F	Y	L	R	S	R	G	I	N	Q	Q	D	A	Q	Q	M	I	I	Y	A	F	A	A	E	L	T	E	A	L	R	D	E	G	L	K	Q
Template Known Secondary structure											S	T	T														S	S																							T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	L	A	R	I	G	Q	R	L	P	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	L	A	R	I	G	Q	R	L	P	G	G
Template Known Secondary structure									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions