Job Description P77689 Confidence 11.02% Date Thu Jan 5 12:31:40 GMT 2012 Rank 75 Aligned Residues 34 % Identity 12% Template c3mhvC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of vps4 and vta1 Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	Q	Q	D	A	Q	Q	M	I	I	Y	A	F	A	A	E	L	T	E	A	L	R	D	E	G	L	K	Q	Q	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	D	L	A	A	R	T	T	M	F	E	I	N	V	G	D	T	P	C	V	L	T	K	E	D	Y	R	T	L	G	A	M
Template Known Secondary structure						S	S											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions