 |
Job Description | P77689 | Confidence | 7.64% | Date | Thu Jan 5 12:31:40 GMT 2012 |
Rank | 98 | Aligned Residues | 56 |
% Identity | 14% | Template | c2fhgC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:proteasome, beta subunit; |
PDBTitle: crystal structure of mycobacterial tuberculosis proteasome
|
Resolution | 3.23 Å |
|
 |
  |   |
362 | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
|
|
. | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | V | G | R | I | D | D | E | Q | I | F | Y | L | R | S | R | . |
. |
. |
G | I | N | Q | Q | D | A | Q | Q | M | I | I | Y | A | F | A | A | E | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | A | L | R | D | E | G | L | K | Q | Q | V | L | A |
Query Conservation |   |
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|
| . | . | . |
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
Q | A | V | G | S | G | S | L | F | A | K | S | S | M | K | K | L | Y | S | Q | V | T | D | G | D | S | G | L | R | V | A | V | E | A | L | Y | D | A | A | D | D | D | S | A | T | G | G | P | D | L | V | R | G | I | F | P | T | A | V | I | I | D | A | D | G | A | V | D | V | P | E | S | R | I | A | E | L | A | R | A |
Template Known Secondary structure |   |
 |  |  | S | T | T |  |  |  |  |  |  |  | T | T | G | G | G | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |
|
|
| B | T | T | T | T | B |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . |
  |
  |   |
413 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
R | I | G | Q | R |
Query Conservation |   |
  |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
Template Sequence |   |
I | I | E | S | R |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
517 | . | . | 520 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|