Return to main results Retrieve Phyre Job Id

Job DescriptionQ47083
Confidence94.53%DateThu Jan 5 12:36:11 GMT 2012
Rank150Aligned Residues42
% Identity12%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10....... ..20.........30.........40..
Predicted Secondary structure 



..



Query SS confidence 
















. .
























Query Sequence  MNFQQLKIIREAARQDY. . NLTEVANMLFTSQSGVSRHIRELED
Query Conservation 
 
  
  
  

   
..
 
 

  
 


 


  
  

 
Alig confidence 
















..
























Template Conservation 

     


  
         


  
 

 



  
  
  
Template Sequence  ITDTDVAVLLKXVEIEKPITSEELADIFKLSKTTVENSLKKLIE
Template Known Secondary structure 


S
T

Template Predicted Secondary structure 










Template SS confidence 











































   1920.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions