Return to main results Retrieve Phyre Job Id

Job DescriptionQ47083
Confidence99.76%DateThu Jan 5 12:36:11 GMT 2012
Rank20Aligned Residues207
% Identity14%Templated1utha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  NDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHH
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Template Sequence  FASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPE. LQTGFFQRRLFRHRY
Template Known Secondary structure  TT





TT

TTSS
TS



TT.

TT
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   93......100.........110.........120.........130.........140.........150...... ...160.........170.
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  SLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSS
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Template Sequence  VCMFRKDHPSA. KSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFA
Template Known Secondary structure  TT
SS
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SS

S

TTSGGGGTT


SSSTTTSS
B
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   172.......180.. .......190.........200.........210.........220.........230.........240.........250
 
   249250... ......260.........270.........280.........290.......
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Query Sequence  GEQEE. ENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSV
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Template Sequence  VRCEVPFGLTTSPHPAKLPDIAINLFWHAKYNRDPGNMWLRQLFVELFSE
Template Known Secondary structure  TTTTT
SS



GGGTT


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   251........260.........270.........280.........290.........300
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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