Return to main results Retrieve Phyre Job Id

Job DescriptionQ47083
Confidence95.91%DateThu Jan 5 12:36:11 GMT 2012
Rank112Aligned Residues41
% Identity20%Templated1r1ua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40..
Predicted Secondary structure 






Query SS confidence 








































Query Sequence  NFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELED
Query Conservation   
  
  
  

   

 
 

  
 


 


  
  

 
Alig confidence 








































Template Conservation     

 

  
      
 


  
 

 



 

  
  
Template Sequence  DYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKS
Template Known Secondary structure  S

B
T

Template Predicted Secondary structure 








Template SS confidence 








































   25....30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions