Job Description Q47083 Confidence 90.88% Date Thu Jan 5 12:36:11 GMT 2012 Rank 191 Aligned Residues 86 % Identity 15% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.																																					.	.	.	.	.	.
Query SS confidence																			.	.																																					.	.	.	.	.	.
Query Sequence		M	N	F	Q	Q	L	K	I	I	R	E	A	A	R	Q	D	Y	.	.	N	L	T	E	V	A	N	M	L	F	T	S	Q	S	G	V	S	R	H	I	R	E	L	E	D	E	L	G	I	E	I	F	V	R	R	G	.	.	.	.	.	.	K	R	L	L	G	M	T	E	P	G	K	A	L	L	V	I	A	E	R
Query Conservation																			.	.																																					.	.	.	.	.	.
Alig confidence																			.	.																										.	.	.									.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	.	.	.	L	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K
Template Known Secondary structure																	S	S												T																.	.	.	T	T	S							T	T		S	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	E	A	S	N	V	R	R	L	A	D	L	F	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	L	I	A	K	T	Y	E	D	L	K	K	L	E	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions