Return to main results Retrieve Phyre Job Id

Job DescriptionQ47083
Confidence44.99%DateThu Jan 5 12:36:11 GMT 2012
Rank344Aligned Residues32
% Identity16%Templatec3bs3A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.....
Predicted Secondary structure 






Query SS confidence 

































Query Sequence  NFQQLKIIREAARQDYNLTEVANMLFTSQSGVSR
Query Conservation   
  
  
  

   

 
 

  
 


 


 
Alig confidence 










.
.



















Template Conservation    



 

  . .
 

 


   


   

 
Template Sequence  XLNRIKVVLAE. K. QRTNRWLAEQXGKSENTISR
Template Known Secondary structure 

B
.T.T

T

Template Predicted Secondary structure  .
.


Template SS confidence 

































   8.10........ . 20.........30.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions