Job Description P32154 Confidence 85.89% Date Thu Jan 5 11:49:34 GMT 2012 Rank 23 Aligned Residues 61 % Identity 13% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	I	V	A	I	T	N	C	P	A	G	I	A	H	T	Y	M	V	A	E	A	L	E	Q	K	A	R	S	L	G	H	T	I	K	V	E	T	Q	G	S	S	G	V	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	S	S	E	E	I	A	A	A	D	Y	V	I	L	A	T
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.				.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.				.	.
Template Sequence		K	P	N	I	L	V	L	F	Y	G	.	Y	G	S	.	.	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	S
Template Known Secondary structure												.	S	S		.	.																T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S
Template Predicted Secondary structure												.				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.		.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions