Job Description P32154 Confidence 46.75% Date Thu Jan 5 11:49:34 GMT 2012 Rank 74 Aligned Residues 133 % Identity 11% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	F	V	I	G	G	G	I	L	V	A	L	A	N	M	L	V	Q	F	G	L	P	Y	T	D	M	S	K	G	A	P	S	F	T	W	V	V	E	S	I	G	Y	L	G	F	T	F	M	I	P	I	M	G	A	Y	I	A	S	S	I	A	D	K	P	A	F	A	P	A	F	L	V	C	Y	L	A	N	D	K
Query Conservation
Alig confidence																					.	.	.																																							.
Template Conservation																					.	.	.																																							.
Template Sequence		I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	.	.	.	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	.	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P
Template Known Secondary structure																					.	.	.		G	G	G	S	S	S	S																													S		.																		T	T
Template Predicted Secondary structure																					.	.	.																																							.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	G	T	Q	S	G	A	G	F	L	G	A	V	V	L	G	L	A	I	G	Y	F	V	F	W	F	R	K	V	R	L	G	K	A	L	Q	P	L	L	G	S	M	L	I	P	F	V	T	L	L	V	F	G	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L
Template Known Secondary structure		T	T	T	T																											T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions