Job Description P16681 Confidence 98.72% Date Thu Jan 5 11:35:25 GMT 2012 Rank 54 Aligned Residues 110 % Identity 16% Template c3huhA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:virulence protein stm3117; PDBTitle: the structure of biphenyl-2,3-diol 1,2-dioxygenase iii-2 related protein from salmonella typhimurium Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	F	A	G	N	C	S	D	A	I	A	Y	Y	Q	R	T	L	G	A	E	L	L	Y	K	I	S	F	G	E	M	P	K	S	A	Q	D	S	A	E	N	C	P	S	G	M	Q	F	P	D	T	A	I	A	H	A	N	V	R	I	A	G	S	D	I	M	M	S	D	A	M	P	S	G	K	A	S	Y	S
Query Conservation
Alig confidence							.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	T	V	S	.	D	I	S	T	T	I	R	F	Y	E	E	V	L	G	F	S	A	V	T	F	K	Q	N	R	K	A	L	I	F	G	A	Q	K	I	N	L	H	Q	Q	E	M	E	F	E	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	R	P	T	P	G	S
Template Known Secondary structure						S	.												T	T								T	T	T							T	T								T	T	B			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			T	T
Template Predicted Secondary structure							.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																					.	80	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																.	.	.
Query SS confidence																									.																.	.	.
Query Sequence		G	F	T	L	V	L	D	S	Q	Q	V	E	E	G	K	R	W	F	D	N	L	A	A	.	N	G	K	I	E	M	A	W	Q	E	T	F	W	A	H	.	.	.	G	F	G	K	V	T	D	K	F	G	V	P	W	M	I	N
Query Conservation																									.																.	.	.
Alig confidence												.	.	.											.																.	.	.
Template Conservation												.	.	.
Template Sequence		A	D	L	C	F	I	T	S	T	P	.	.	.	I	N	D	V	V	S	E	I	L	Q	A	G	I	S	I	V	E	G	P	V	E	R	T	G	A	T	G	E	I	M	S	I	Y	I	R	D	P	D	G	N	L	I	E	I	S
Template Known Secondary structure									S	S		.	.	.											T	T				S									T	T											T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions