Job Description P16681 Confidence 98.74% Date Thu Jan 5 11:35:25 GMT 2012 Rank 50 Aligned Residues 107 % Identity 14% Template c3ey7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl-2,3-diol 1,2-dioxygenase iii-related PDBTitle: structure from the mobile metagenome of v. cholerae.2 integron cassette protein vch_cass1 Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		L	S	F	A	G	N	C	S	D	A	I	A	Y	Y	Q	R	T	L	G	A	E	L	L	Y	K	I	S	F	G	E	M	P	K	S	A	Q	D	S	A	E	N	C	P	S	G	M	Q	F	P	D	T	A	I	A	H	A	N	V	R	I	A	G	S	D	I	M	M	S	.	.	.	D	A	M	P	S	G	K	A	S
Query Conservation																																																																						.	.	.
Alig confidence						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.														.	.	.
Template Conservation						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Sequence		L	T	V	A	.	D	I	P	T	T	T	N	F	Y	E	K	V	L	G	X	K	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	A	G	R	.	.	.	.	I	A	L	E	F	G	H	Q	K	I	N	L	H	Q	L	G	N	E	F	E	P	K	A	Q	N
Template Known Secondary structure					S	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T		.	.	.	.						T	T								T	T	S			S	S			T	T
Template Predicted Secondary structure						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template SS confidence
		15	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																							.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																											.											.	.	.
Query SS confidence																											.											.	.	.
Query Sequence		Y	S	G	F	T	L	V	L	D	S	Q	Q	V	E	E	G	K	R	W	F	D	N	L	A	A	.	N	G	K	I	E	M	A	W	Q	E	.	.	.	T	F	W	A	H	G	F	G	K	V	T	D	K	F	G	V	P	W	M	I	N	V
Query Conservation																											.											.	.	.
Alig confidence																											.											.	.	.
Template Conservation
Template Sequence		V	R	V	G	S	A	D	L	C	F	I	T	D	T	V	L	S	D	A	X	K	H	V	E	D	Q	G	V	T	I	X	E	G	P	V	K	R	T	G	A	Q	G	A	I	T	S	F	Y	F	R	D	P	D	G	N	L	I	E	V	S	T
Template Known Secondary structure				T	T									S	S												T	T													T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions