Return to main results Retrieve Phyre Job Id

Job DescriptionP16681
Confidence99.38%DateThu Jan 5 11:35:25 GMT 2012
Rank13Aligned Residues110
% Identity15%Templatec2rk9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: the crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase superfamily member from vibrio splendidus 12b01
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAMPSG
Query Conservation 


 
 
 
 
   

  

  


 
          
                    
 

 
 
 
  
   
     
Alig confidence 









.

























........................

















.
Template Conservation      
 
 
 .

  
  

   


           ........................                  .
Template Sequence  LRVVPELYCF. DINVSQSFFVDVLGFEVKYERPDEEF. . . . . . . . . . . . . . . . . . . . . . . . VYLTLDGVDVXLEGLEFP.
Template Known Secondary structure 


S.STT

GGGT........................TT


SS.
Template Predicted Secondary structure 

.







........................







.
Template SS confidence 















































































   5....10.... .....20.........30.........40 .........50........
 
   81........90.........100........ .110.........120. ........130.........140.
Predicted Secondary structure 








.





....







Query SS confidence 



























.












. . . .



















Query Sequence  KASYSGFTLVLDSQQVEEGKRWFDNLAA. NGKIEMAWQETFW. . . . AHGFGKVTDKFGVPWMINVV
Query Conservation          
 
              
  .

 
  
     
....
   
 
 
  
  
 
   
Alig confidence  ..












...









.












....



















Template Conservation  ..            
...           
                
     
 



  


 
 
Template Sequence  . . LGSGVNFQWDVID. . . IEPLYQRVNESAADSIYLALESKSYQIATQKQFXVQTPDGYLFRFCQD
Template Known Secondary structure  ..
STT
S
...
GGG


TTS
Template Predicted Secondary structure  ..





...



















Template SS confidence 

































































   71........80... ......90.........100.........110.........120.........130.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions