Job Description P31600 Confidence 99.67% Date Wed Jan 25 15:20:48 GMT 2012 Rank 35 Aligned Residues 229 % Identity 8% Template d2onda1 SCOP info alpha-alpha superhelix TPR-like HAT/Suf repeat Resolution 2.80

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.															.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.		.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.						.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.						.
Query Sequence		A	D	N	C	P	A	I	V	R	L	L	G	D	M	S	P	S	Y	D	A	A	A	W	N	R	L	A	K	C	Y	R	D	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	A	L	Y	A	W	L	Q	A	E	Q	R	Q	.	P	S	A	W	Q	.	H	R	A	V	A	Y	Q	A	Y	Q
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.						.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.						.
Template Conservation
Template Sequence		T	K	R	V	X	F	A	Y	E	Q	C	L	L	V	L	G	H	H	P	D	I	W	Y	E	A	A	Q	Y	L	E	Q	S	S	K	L	L	A	E	K	G	D	X	N	N	A	K	L	F	S	D	E	A	A	N	I	Y	E	R	A	I	S	T	L	L	K	K	N	X	L	L	Y	F	A	Y	A	D	Y	E	E	S
Template Known Secondary structure																	T	T																						T	S																					T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.			.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.		.	.	.	.	.	.	.	600	.
Predicted Secondary structure																						.	.																																																	.
Query SS confidence																						.	.																																																	.
Query Sequence		V	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L	H	D	M	S	.	.	N	E	D	L	L	A	A	A	N	T	A	Q	A	A	G	N	G	A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	.	G	Q	P	E	L	A	L	N	D
Query Conservation																						.	.																																																	.
Alig confidence																						.	.																																																	.
Template Conservation
Template Sequence		R	X	K	Y	E	K	V	H	S	I	Y	N	R	L	L	A	I	E	D	I	D	P	T	L	V	Y	I	Q	Y	X	K	F	A	R	R	A	E	G	I	K	S	G	R	X	I	F	K	K	A	R	E	D	A	R	T	R	H	H	V	Y	V	T	A	A	L	X	E	Y	Y	C	S	K	D	K	S	V	A	F	K	I
Template Known Secondary structure		T	T														T	S	S	S	S		T																													T	S	T	T			T													T	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		602	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.					.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure												.																																					.	.	.	.
Query SS confidence												.																																					.	.	.	.
Query Sequence		L	T	R	S	I	N	I	A	P	S	.	A	N	A	Y	V	A	R	A	T	I	Y	R	Q	R	H	N	V	P	A	A	V	S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	.	.	.	.	T	Q	A	A	L	G	Y	A	L	W	D	S	G	D	I	A	Q	S	R	E	M	L	E	P	A	H	K	G	L
Query Conservation												.																																					.	.	.	.
Alig confidence												.																																					.	.	.	.
Template Conservation
Template Sequence		F	E	L	G	L	K	K	Y	G	D	I	P	E	Y	V	L	A	Y	I	D	Y	L	S	H	L	N	E	D	N	N	T	R	V	L	F	E	R	V	L	T	S	G	S	L	P	P	E	K	S	G	E	I	W	A	R	F	L	A	F	E	S	N	I	G	D	L	A	S	I	L	K	V	E	K	R	R	F	T	A	F
Template Known Secondary structure										T	T														T	T																S	S	S	S		G	G	G																S																T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	D	P	A	L	I	R	Q	L	A	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	E	Y	E	G	K	E	T	A	L	L	V
Template Known Secondary structure		T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions