Job Description P31600 Confidence 28.71% Date Wed Jan 25 15:20:48 GMT 2012 Rank 162 Aligned Residues 121 % Identity 17% Template d1qjpa_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.65

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		829	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Q	I	F	F	I	A	V	E	Q	Q	L	P	L	N	G	Q	N	G	A	S	D	T	M	L	R	A	S	A	S	F	F	N	G	G	K	Y	S	D	E	W	H	P	N	G	S	G	W	F	A	Q	N	L	Y	L	D	A	A	Q	Y	I	R	Q	D	I	Q	A	W	T	A	D	Y	R	V	S	W	H	Q	K
Query Conservation
Alig confidence													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		K	D	N	T	W	Y	T	G	A	K	L	.	.	.	.	G	W	S	Q	H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	.	.	.	.	.	.	.	.	.	.	.	Y	D	W	L	G	R	.	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P
Template Known Secondary structure			T	T									.	.	.	.																					T	T							.	.	.	.	.	.	.	.	.	.	.							.
Template Predicted Secondary structure													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		909	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.											.	.	.	940	.	.	.	.	.				.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	.	.	.	.	.	.	.	.	.	.	G	G	V	G	V	R	W	N	I	.	.	.	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G	V	E	Y	Q	H
Query Conservation																														.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence						.	.																							.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation						.	.
Template Sequence		I	T	D	D	.	.	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure		S	S	S	S	.	.																			S	S	S																						T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		87	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions