Job Description P31600 Confidence 86.84% Date Wed Jan 25 15:20:48 GMT 2012 Rank 124 Aligned Residues 134 % Identity 18% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		847	.	.	850	.	.	.	.	.	.	.	.	.	860								.	.	.	.	.	.	.	.	.	870	.	.			.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.													.	.
Query SS confidence																.	.	.	.	.	.	.													.	.
Query Sequence		N	G	A	S	D	T	M	L	R	A	S	A	S	F	.	.	.	.	.	.	.	F	N	G	G	K	Y	S	D	E	W	H	P	.	.	N	G	S	G	W	F	A	Q	N	L	Y	L	D	A	A	Q	Y	I	R	Q	D	I	Q	A	W	T	A	D	Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P
Query Conservation																.	.	.	.	.	.	.													.	.
Alig confidence																.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		E	G	A	S	G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P
Template Known Secondary structure																					S	S																	T	T													S	S			S	S																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		918	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.											.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	.	.	.	.	.	.	.	.	.	.	G	G	V	G	V	R	W	N	I	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G	V	E	Y	Q	H	T	F	K	A	I	N	Q	R	N	G	E	R	N	N	A	F	L	T	I	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	.	.	.	.	.	.	.	.	.	.	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	S	A	G
Template Known Secondary structure																	T	T																							.	.	.	.	.	.	.	.	.	.	T	T																T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		988	.	990
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		151	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions