Job Description P31600 Confidence 43.55% Date Wed Jan 25 15:20:48 GMT 2012 Rank 151 Aligned Residues 135 % Identity 10% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.				.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900
Predicted Secondary structure																		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	G	A	S	D	T	M	L	R	A	S	A	S	F	F	.	.	.	N	G	G	K	Y	S	D	E	W	H	P	N	G	S	G	W	F	A	Q	N	L	Y	L	D	A	A	Q	Y	I	R	Q	D	I	Q	A	W	T	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																						.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		A	P	K	D	N	T	W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	.	.	.	.	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	F	L	G	R	M	P	Y	K	G	S	V	E	N	G	A	Y	K	A	Q	G
Template Known Secondary structure																					S	S	S			B	S	S					S	S								.	.	.	.						T	T	T												S		T	T		S	S				S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.									.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	.	.	.	.	.	.	.	.	G	G	V	G	V	R	W	N	I	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G	V	E	Y	Q	H	T	F	K	A	I
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	.	.	.	.	.	.	E	I	A	T	R	L	E	Y	Q	F	T	N	N	I	G	D	A
Template Known Secondary structure												S	S	S	S																		S	B	T	T	B																					T	.	.	.	.	.	.	T																B
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	R	N	G	E	R	N	N	A	F	L	T	I	G	V	H	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	I	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y
Template Known Secondary structure		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions