Job Description P31600 Confidence 79.27% Date Wed Jan 25 15:20:48 GMT 2012 Rank 127 Aligned Residues 88 % Identity 18% Template c3qq2C_ PDB info PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka Resolution 3.00 Å

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		895	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.													.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	W	T	A	D	Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	G	V	R	W	N	I	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																																																			.	.
Template Sequence		S	G	A	A	W	S	L	E	G	G	R	R	F	E	L	P	N	D	W	F	A	E	P	Q	A	E	V	M	L	W	R	T	S	G	K	R	Y	R	A	S	N	G	L	R	V	K	V	D	A	N	T	A	T	L	G	R	L	G	L	R	F	G	R	R	I	.	.	A	L	A	G	G	N	I	V	Q	P	Y	A	R
Template Known Secondary structure												B					G	G	G																						S	S	S																								.	.			T	T	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		862	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.			.	.	.	930	.	.	.	.	.	.	.	.	.
		963	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Y	Q	H	T	F	K	A	I	N	Q	R	N	G	E	R	N	N	A	F	L	T	I	G	V
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		L	G	W	T	Q	E	F	K	S	T	G	R	H	G	R	V	E	.	.	.	.	L	G	A	G	V
Template Known Secondary structure														B					.	.	.	.
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.					.	.	.	960	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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