Job Description P31600 Confidence 99.63% Date Wed Jan 25 15:20:48 GMT 2012 Rank 43 Aligned Residues 177 % Identity 12% Template c3qdnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		531	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		A	L	A	A	W	Q	K	I	S	L	H	D	M	S	.	N	E	D	L	L	A	A	A	N	T	A	Q	A	A	G	N	G	A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	I	A
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		E	E	A	I	R	A	L	L	D	K	V	L	P	R	E	E	E	L	K	A	Q	Q	A	X	Q	L	X	Q	E	G	N	Y	I	D	A	L	P	L	L	K	D	A	W	Q	L	S	S	Q	N	S	E	I	G	L	L	L	A	E	A	Q	I	A	L	N	R	S	E	E	A	E	A	V	L	K	T	I	P	L	Q	D
Template Known Secondary structure											T	T	S																	T	T																T	T	S															T	T										T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.			.	680	.	.	.	.	.	.
Predicted Secondary structure				.																																																																				.	.
Query SS confidence				.																																																																				.	.
Query Sequence		P	S	.	A	N	A	Y	V	A	R	A	T	I	Y	R	Q	R	H	N	V	P	A	A	V	S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G	Y	A	L	W	D	S	G	D	I	A	Q	S	R	E	M	L	E	P	A	H	K	G	L	P	D	.	.	D	P	A	L	I	R	Q	L
Query Conservation				.																																																																				.	.
Alig confidence				.																																																																				.	.
Template Conservation
Template Sequence		Q	D	T	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q	L	Q	Q	Q	V	A	D	N	P	Q	D	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	V	G	R	N	E	E	A	L	E	L	L	F	S	H	L	R	K	D	L	T	A	A	E	G	Q	T	R	K	T	F
Template Known Secondary structure																				T														S		T	T															T	T														T	T		T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	V	N	Q	R	L	D	D	M	P	A	T	Q	H	Y	A	R	L	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	I	L	A	A	L	G	T	G	D	A	L	A	S	K	Y	R	R	Q	L
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions