Job Description P31600 Confidence 98.94% Date Wed Jan 25 15:20:48 GMT 2012 Rank 93 Aligned Residues 195 % Identity 7% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.						550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure																																				.	.	.	.																				.						.	.	.	.	.
Query SS confidence																																				.	.	.	.																				.						.	.	.	.	.
Query Sequence		D	T	L	P	G	V	A	L	Y	A	W	L	Q	A	E	Q	R	Q	P	S	A	W	Q	H	R	A	V	A	Y	Q	A	Y	Q	V	.	.	.	.	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L	H	D	M	S	.	N	E	D	L	L	.	.	.	.	.	A	A	A	N	T	A	Q	A	A	G	N	G
Query Conservation																																				.	.	.	.																				.						.	.	.	.	.
Alig confidence																																				.	.	.	.																				.						.	.	.	.	.
Template Conservation
Template Sequence		E	N	E	N	K	P	N	V	A	N	F	E	A	A	V	A	A	K	D	Y	E	K	A	C	S	E	L	L	L	I	L	S	Q	L	D	S	N	F	G	G	I	Q	E	I	E	F	E	Y	P	A	Q	L	Q	D	L	E	Q	E	K	I	V	Y	F	C	T	R	M	A	T	A	I	T	T	L	F	S	D	P	V	L
Template Known Secondary structure		T	T	T	T			B										T	T																			T	T	T			T	T		B					G	G	G	T	T																							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.						.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																																		.
Query SS confidence																			.	.	.	.	.																																		.
Query Sequence		A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	.	.	.	.	.	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	I	A	P	S	.	A	N	A	Y	V	A	R	A	T	I	Y	R	Q	R	H	N	V	P	A	A	V	S	D	L
Query Conservation																			.	.	.	.	.																																		.
Alig confidence																			.	.	.	.	.																																		.
Template Conservation
Template Sequence		E	I	S	D	L	G	V	Q	R	F	L	V	Y	Q	R	W	L	A	L	I	F	A	S	S	P	F	V	N	A	D	H	I	L	Q	T	Y	N	R	E	P	N	R	K	N	S	L	E	I	H	L	D	S	S	K	S	S	L	I	K	F	C	I	L	Y	L	P	E	S	N	V	N	L	N	L	D	V	M	W	N	I
Template Known Secondary structure														T										S	S	T	T		S	S					G	G	G				S			S		T	T	S					S														T	T			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G	Y	A	L	W	D	S	G	D	I	A	Q	S	R	E	M	L	E	P	A	H	K	G	L	P	D	D	P	A	L	I	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	E	L	C	A	S	L	C	F	A	L	Q	S	P	R	F	I	G	T	S	T	A	F	N	K	R	A	T	I	L	Q	W	F	P	R	H	L	D	Q	L	K	N	L	N	N	I	P	S	A	I
Template Known Secondary structure																	S				S																			T	T				S	S	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions