Job Description P31600 Confidence 55.03% Date Wed Jan 25 15:20:48 GMT 2012 Rank 140 Aligned Residues 120 % Identity 13% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.				.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		Q	N	G	A	S	D	T	M	L	R	A	S	A	S	F	F	N	G	G	K	.	.	.	Y	S	D	E	W	H	P	N	G	S	G	W	F	A	Q	N	L	Y	L	D	A	A	Q	Y	I	R	Q	D	I	Q	A	W	T	A	D	Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																																.	.
Template Conservation																																																																								.	.
Template Sequence		A	P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	.	.	L	D	I	Y	T	R	L	G
Template Known Secondary structure					T	T																													T	T																																S	S	S	S	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.
		923	.	.	.	.	.	.	930	.	.	.	.	.	.											.	.	.	940	.	.	.	.	.				.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	.	.	.	.	.	.	.	.	.	.	G	G	V	G	V	R	W	N	I	.	.	.	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G	V	E	Y	Q	H
Query Conservation																.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure												S	S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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