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Job DescriptionP31600
Confidence63.95%DateWed Jan 25 15:20:48 GMT 2012
Rank136Aligned Residues140
% Identity12%Templatec3kaeC_
PDB info PDB header:protein bindingChain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  LDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARLLLEDQLKRHPGDARLERSLAAIPVEVKS
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Template Sequence  IGKICKSIRYRDYETAIFLAACLLPCKPE. . . YRMLMSIVLYLNGEYTRALFHLHKL. . . . . NTCTSKYYESLCYKKKKD
Template Known Secondary structure  TT

ST...TTT
T
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BTT
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   6...10.........20.........30.... .....40.........50......... 60.........70.......
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  VTTVEELLAQQKACDAAPTLRCRSEVGQNALRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNE
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Template Sequence  YKKAIKSLESILEGKVERDP. . . . . . . . . . . . . . DVD. . . . ARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVR
Template Known Secondary structure  TT
SB


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TT
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   78.80.........90....... ..100 .........110.........120.........130.........
 
   211.....
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Query Sequence  ARQQNT
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Template Sequence  SFGKSF
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   140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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