Job Description P31600 Confidence 63.95% Date Wed Jan 25 15:20:48 GMT 2012 Rank 136 Aligned Residues 140 % Identity 12% Template c3kaeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus Resolution 2.30 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	A	L	K	A	Q	K	N	N	D	E	A	T	A	I	R	E	F	E	Y	I	H	Q	Q	V	P	D	N	I	P	L	T	L	Y	L	A	E	A	Y	R	H	F	G	H	D	D	R	A	R	L	L	L	E	D	Q	L	K	R	H	P	G	D	A	R	L	E	R	S	L	A	A	I	P	V	E	V	K	S
Query Conservation
Alig confidence																															.	.	.																										.	.	.	.	.
Template Conservation																															.	.	.																										.	.	.	.	.
Template Sequence		I	G	K	I	C	K	S	I	R	Y	R	D	Y	E	T	A	I	F	L	A	A	C	L	L	P	C	K	P	E	.	.	.	Y	R	M	L	M	S	I	V	L	Y	L	N	G	E	Y	T	R	A	L	F	H	L	H	K	L	.	.	.	.	.	N	T	C	T	S	K	Y	Y	E	S	L	C	Y	K	K	K	K	D
Template Known Secondary structure											T	T																	S	T	.	.	.	T											T	T											T		.	.	.	.	.		B														T	T
Template Predicted Secondary structure																															.	.	.																										.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	T	V	E	E	L	L	A	Q	Q	K	A	C	D	A	A	P	T	L	R	C	R	S	E	V	G	Q	N	A	L	R	L	A	Q	L	P	V	A	R	A	Q	L	N	D	A	T	F	A	A	S	P	E	G	K	T	L	R	T	D	L	L	Q	R	A	I	Y	L	K	Q	W	S	Q	A	D	T	L	Y	N	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Sequence		Y	K	K	A	I	K	S	L	E	S	I	L	E	G	K	V	E	R	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	.	.	.	.	A	R	I	Q	E	M	F	V	D	P	G	D	E	E	F	F	E	S	L	L	G	D	L	C	T	L	S	G	Y	R	E	E	G	I	G	H	Y	V	R
Template Known Secondary structure														T	T		S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.					T	T	S			T	T																T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.															.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	Q	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	G	K	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions