Job Description P31600 Confidence 26.54% Date Wed Jan 25 15:20:48 GMT 2012 Rank 165 Aligned Residues 225 % Identity 8% Template c3eiqC_ PDB info PDB header:hydrolase/antitumor protein Chain: C: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of pdcd4-eif4a Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.			.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																								.	.																																																								.
Query SS confidence																								.	.																																																								.
Query Sequence		N	R	L	A	K	C	Y	R	D	T	L	P	G	V	A	L	Y	A	W	L	Q	A	.	.	E	Q	R	Q	P	S	A	W	Q	H	R	A	V	A	Y	Q	A	Y	Q	V	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L	H	D	M	S	N	E	D	L	L	A	A	A	N	T	A	Q	A	A	G	N	.
Query Conservation																								.	.																																																								.
Alig confidence																								.	.																																																								.
Template Conservation
Template Sequence		P	I	I	Q	E	Y	F	E	H	G	D	T	N	E	V	A	E	M	L	R	D	L	N	L	G	E	M	K	S	G	V	P	V	L	A	V	S	L	A	L	E	G	K	A	S	H	R	E	M	T	S	K	L	L	S	D	L	C	G	T	V	M	S	T	N	D	V	E	K	S	F	D	K	L	L	K	D	L	P	E
Template Known Secondary structure																						T	T	T			G	G	G	G	G										T	T	S														T	T	T	T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
										561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.			.	.	610	.	.	.	.	.						.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																.	.									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																.	.									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	G	A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	.	.	I	A	P	S	A	N	A	Y	.	.	.	.	.	V	A	R	A	T	I	Y	R	Q	R
Query Conservation		.	.	.	.	.	.	.	.																																																.	.									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																.	.									.	.	.	.	.
Template Conservation
Template Sequence		L	A	L	D	T	P	R	A	P	Q	L	V	G	Q	F	I	A	R	A	V	G	D	G	I	L	C	N	T	Y	I	D	S	Y	K	D	C	V	Q	A	R	A	A	L	D	K	A	T	V	L	L	S	M	V	W	G	S	G	G	G	Q	Q	P	V	N	H	L	V	K	E	I	D	M	L	L	K	E	Y	L	L	S
Template Known Secondary structure							T	T															T	T		S		S	S	T	T	G	G	G																		T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.			.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.						.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																							.	.	.	.	.
Query SS confidence																																									.	.																							.	.	.	.	.
Query Sequence		H	N	V	P	A	A	V	S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G	Y	A	L	W	D	S	G	D	I	A	Q	.	.	S	R	E	M	L	E	P	A	H	K	G	L	P	D	D	P	A	L	I	R	Q	L	.	.	.	.	.	A	Y	V	N	Q	R	L	D	D	M	P	A
Query Conservation																																									.	.																							.	.	.	.	.
Alig confidence																																									.	.																							.	.	.	.	.
Template Conservation
Template Sequence		G	D	I	S	E	A	E	H	C	L	K	E	L	E	V	P	H	F	H	H	E	L	V	Y	E	A	I	V	M	V	L	E	S	T	G	E	S	A	F	K	M	I	L	D	L	L	K	S	L	W	K	S	S	T	I	T	I	D	Q	M	K	R	G	Y	E	R	I	Y	N	E	I	P	D	I	N	L	D	V	P	H
Template Known Secondary structure																	T	T																		S	S																T	T		S																								T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		699	700	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	H	Y	A	R	L	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	S	V	L	E	R	F	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions