Job Description P31600 Confidence 65.97% Date Wed Jan 25 15:20:48 GMT 2012 Rank 135 Aligned Residues 59 % Identity 22% Template c2wjqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable n-acetylneuraminic acid outer membrane channel PDBTitle: nanc porin structure in hexagonal crystal form. Resolution 2.00 Å

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		900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	G	G	V	G	V	R	W	N	I	W	T	G	E	T	H	Y	D	A	W	P	H	K	V	S	L	G	V	E	Y	Q	H	T	F	K	A	I	N
Query Conservation
Alig confidence																									.	.	.									.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																									.	.	.									.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H	.	.	.	F	S	S	N	G	T	R	Y	.	.	.	.	G	P	Y	V	K	L	S	W	D	A	.	.	.	.	.	.	.	.	T	K	D	L	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R
Template Known Secondary structure											S	S	S	S											.	.	.			T	T					.	.	.	.											.	.	.	.	.	.	.	.	S	S	S													S	S
Template Predicted Secondary structure																									.	.	.									.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions