Job Description P31600 Confidence 99.84% Date Wed Jan 25 15:20:48 GMT 2012 Rank 26 Aligned Residues 209 % Identity 13% Template c2vq2A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:putative fimbrial biogenesis and twitching PDBTitle: crystal structure of pilw, widely conserved type iv pilus2 biogenesis factor Resolution 1.54 Å

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		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.			.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																							.																														.	.
Query SS confidence																																							.																														.	.
Query Sequence		D	A	A	A	W	N	R	L	A	K	C	Y	R	D	T	L	P	G	V	A	L	Y	A	W	L	Q	A	E	Q	R	Q	P	S	A	W	Q	H	.	R	A	V	A	Y	Q	A	Y	Q	V	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L	H	D	M	S	.	.	N	E	D	L	L	A	A	A	N	T	A
Query Conservation																																							.																														.	.
Alig confidence																																							.																														.	.
Template Conservation
Template Sequence		S	N	I	K	T	Q	L	A	M	E	Y	M	R	G	Q	D	Y	R	Q	A	T	A	S	I	E	D	A	L	K	S	D	P	K	N	E	L	A	W	L	V	R	A	E	I	Y	Q	Y	L	K	V	N	D	K	A	Q	E	S	F	R	Q	A	L	S	I	K	P	D	S	A	E	I	N	N	N	Y	G	W	F	L	C
Template Known Secondary structure															T	T																	T	T															T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.			.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure																			.	.																																								.
Query SS confidence																			.	.																																								.
Query Sequence		Q	A	A	G	N	G	A	A	R	D	R	W	L	Q	Q	A	E	.	.	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	I	A	P	S	.	A	N	A	Y	V	A	R	A	T	I	Y	R	Q	R	H	N	V	P	A	A	V
Query Conservation																			.	.																																								.
Alig confidence																			.	.																																								.
Template Conservation
Template Sequence		G	R	L	N	R	P	A	E	S	M	A	Y	F	D	K	A	L	A	D	P	T	Y	P	T	P	Y	I	A	N	L	N	K	G	I	C	S	A	K	Q	G	Q	F	G	L	A	E	A	Y	L	K	R	S	L	A	A	Q	P	Q	F	P	P	A	F	K	E	L	A	R	T	K	M	L	A	G	Q	L	G	D	A	D
Template Known Secondary structure		T	T	T															T	S	T	T		S																T	T																S	T	T																T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G	.	Y	A	L	W	D	S	G	D	I	A	Q	S	R	E	M	L	E	P	A	H	K	G	L	P	D	D	P	A	L	I	R	Q	L	A
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		Y	Y	F	K	K	Y	Q	S	R	V	E	V	L	Q	A	D	D	L	L	L	G	W	K	I	A	K	A	L	G	N	A	Q	A	A	Y	E	Y	E	A	Q	L	Q	A	N	F	P	Y	S	E	E	L	Q	T	V	L	T
Template Known Secondary structure													S																T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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