Job Description P31600 Confidence 99.86% Date Wed Jan 25 15:20:48 GMT 2012 Rank 24 Aligned Residues 190 % Identity 14% Template c2q7fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:yrrb protein; PDBTitle: crystal structure of yrrb: a tpr protein with an unusual peptide-2 binding site Resolution 2.49 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		C	P	A	I	V	R	L	L	G	D	M	S	P	S	Y	D	A	A	A	W	N	R	L	A	K	C	Y	R	D	T	L	P	G	V	A	L	Y	A	W	L	Q	A	E	Q	R	Q	P	S	A	W	Q	.	H	R	A	V	A	Y	Q	A	Y	Q	V	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L	H	D
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		A	A	E	A	F	T	K	A	I	E	E	N	K	E	D	A	I	P	Y	I	N	F	A	N	L	L	S	S	V	N	E	L	E	R	A	L	A	F	Y	D	K	A	L	E	L	D	S	S	A	A	T	A	Y	Y	G	A	G	N	V	Y	V	V	K	E	M	Y	K	E	A	K	D	M	F	E	K	A	L	R	A	G
Template Known Secondary structure				T	T						T	T		T	T															T	T																	T	T															T	T																T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		543	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620
Predicted Secondary structure				.																																																																				.
Query SS confidence				.																																																																				.
Query Sequence		M	S	.	N	E	D	L	L	A	A	A	N	T	A	Q	A	A	G	N	G	A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	I	A	P	S	.	A	N	A	Y	V	A	R	A	T
Query Conservation				.																																																																				.
Alig confidence				.																																																																				.
Template Conservation
Template Sequence		M	E	N	G	D	L	F	Y	M	L	G	T	V	L	V	K	L	E	Q	P	K	L	A	L	P	Y	L	Q	R	A	V	E	L	N	E	N	D	T	E	A	R	F	Q	F	G	M	C	L	A	N	E	G	M	L	D	E	A	L	S	Q	F	A	A	V	T	E	Q	D	P	G	H	A	D	A	F	Y	N	A	G	V
Template Known Secondary structure				S														T	S																	T	T																T																	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	R	Q	R	H	N	V	P	A	A	V	S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	A	Y	K	E	N	R	E	K	A	L	E	M	L	D	K	A	I	D	I	Q	P	D	H	M	L	A	L	H	A	K	K
Template Known Secondary structure						T	T		T	T														T	T									T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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