Job Description P31600 Confidence 99.69% Date Wed Jan 25 15:20:48 GMT 2012 Rank 34 Aligned Residues 382 % Identity 11% Template c1slyA_ PDB info PDB header:glycosyltransferase Chain: A: PDB Molecule:70-kda soluble lytic transglycosylase; PDBTitle: complex of the 70-kda soluble lytic transglycosylase with2 bulgecin a Resolution 2.80 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	A	T	L	P	V	L	L	K	E	G	Q	Y	D	A	A	Q	K	L	L	A	T	L	P	A	N	E	M	L	E	E	R	Y	A	V	S	V	A	T	R	N	K	A	E	A	L	R	L	A	R	L	L	Y	Q	Q	E	P	A	N	L	T	R	L	D	Q	L	T	W	Q	L	M	Q	N	E	Q	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	Y	R	Q	I	T	D	D	L	M	N	Q	P	A	V	T	V	T	N	F	V	R	A	N	P	T	L	P	P	A	R	T	L	Q	S	R	F	V	N	E	L	A	R	R	E	D	W	R	G	L	L	A	F	S	P	E	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E
Template Known Secondary structure										T	G	G	G														T	T																			T											S			S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	A	D	L	L	L	Q	R	Y	P	F	Q	G	D	A	R	V	S	Q	T	L	M	A	R	L	A	S	L	L	E	S	H	P	Y	L	A	T	P	A	K	V	A	I	L	S	K	P	L	P	L	A	E	Q	R	Q	W	Q	S	Q	L	P	G	I	A	D	N	C	P	A	I	V	R	L	L	G	D	M	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		A	W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D	K	L	F	S	V	W	R	A	S	G	K	Q	D	P	L	A	Y	L	E	R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T
Template Known Secondary structure											S		S	S				T	T											T	T		S															T	T											S			T	T	T	G	G	G											G	G	G
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
											475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.						.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	S	P	S	Y	D	A	A	A	W	N	R	L	A	K	C	Y	R	D	T	L	P	G	V	A	L	Y	A	W	L	Q	A	E	Q	R	Q	P	S	A	W	Q	H	R	.	.	.	.	.	A	V	A	Y	Q	A	Y	Q	V	E	D	Y	A	T	A	L	A	A	W	Q	K	I	S	L
Query Conservation		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation
Template Sequence		V	L	T	F	A	R	T	T	G	A	T	D	F	T	R	Q	M	A	A	V	A	F	A	S	V	A	R	Q	D	A	E	N	A	R	L	M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	Q	I	Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M
Template Known Secondary structure							T	T	S																																				T	T															G	G	G		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	M	S	N	E	D	L	L	A	A	A	N	T	A	Q	A	A	G	N	G	A	A	R	D	R	W	L	Q	Q	A	E	K	R	G	L	G	S	N	A	L	Y	W	W	L	H	A	Q	R	Y	I	P	G	Q	P	E	L	A	L	N	D	L	T	R	S	I	N	I	A	P	S	A	N	A	Y	V	A	R	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	Q	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A	K	E	K	D	E	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q	Q	R	G	F	Y	P	M	V	A	A	Q	R	I
Template Known Secondary structure		T																T	T	T											T	S		T	T	G	G	G	S														T	T													T	T	S		S										T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	R	Q	R	H	N	V	P	A	A	V	S	D	L	R	A	A	L	E	L	E	P	N	N	S	N	T	Q	A	A	L	G	Y	A	L	W	D	S	G	D	I	A	Q	S	R	E	M	L	E	P	A	H	K	G	L	P	D	D	P	A	L	I	R	Q	L	A	Y	V	N	Q	R	L	D	D	M	P	A	T	Q
Query Conservation
Alig confidence																									.	.	.	.	.																																				.	.
Template Conservation																									.	.	.	.	.																																				.	.
Template Sequence		G	E	E	Y	E	L	K	I	D	K	A	P	Q	N	V	D	S	A	L	T	Q	G	P	.	.	.	.	.	E	M	A	R	V	R	E	L	M	Y	W	N	L	D	N	T	A	R	S	E	W	A	N	L	V	K	S	K	S	K	T	E	Q	A	Q	.	.	L	A	R	Y	A	F	N	N	Q	W	W	D	L	S	V
Template Known Secondary structure		T												S									S		.	.	.	.	.											T	T														T	T	S								.	.								T	T
Template Predicted Secondary structure																									.	.	.	.	.																																				.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.						.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		701	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	R	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	T	I	A	G
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions