Job Description P31600 Confidence 78.35% Date Wed Jan 25 15:20:48 GMT 2012 Rank 129 Aligned Residues 122 % Identity 13% Template c1qd6C_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); PDBTitle: outer membrane phospholipase a from escherichia coli Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.																		.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.										870	.	.					.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.				.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.				.	.	.	.
Query Sequence		K	P	L	R	D	Q	I	F	F	I	A	V	E	Q	Q	L	P	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	N	G	A	S	D	T	M	L	R	A	S	A	S	F	F	N	G	G	K	Y	S	D	E	.	.	.	.	.	.	.	.	.	W	H	P	.	.	.	.	N	G	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.				.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.				.	.	.	.
Template Conservation
Template Sequence		S	P	F	R	E	T	N	Y	E	P	Q	L	F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	D	V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	G	N	W	L	V	E	V	K	P	W	Y	V	V	G	N	T	D	D	N	P
Template Known Secondary structure																								T	T																			T	T	S																T	T												S			T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		876	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.												900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	W	F	A	Q	N	L	Y	L	D	A	A	Q	Y	I	R	Q	D	I	Q	A	W	T	A	.	.	.	.	.	.	.	.	.	.	.	D	Y	R	V	S	W	H	Q	K	V	A	N	G	Q	T	I	E	P	Y	A	H	V	Q	D	N	G	Y	R	D	K	G	T	Q	G	A	Q	L	G	G	V	G	V	R	W	N
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	G	D	A	V	L	S	A	K	G	Q	Y	N	W	N	T	G	Y	G	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T	Q	V	Y	S	G	Y	G	E	S	L	I	D	Y	N	F	N	Q	T	R	V	G	V	G	V	M	L	N
Template Known Secondary structure		T							S										T	T											T	T	T															T	T													S	S	G	G	G	T	T												S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		945	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions