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Job DescriptionP46136
Confidence0.89%DateThu Jan 5 12:04:07 GMT 2012
Rank43Aligned Residues178
% Identity9%Templatec3lrcC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1)
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170.........180..
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Query Sequence  GQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARG. . . . . . . . . . . .
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Template Sequence  KRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA
Template Known Secondary structure  TT


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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  FNGITVFVLLTGASLWVYYFLTPQPEMIFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAV
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Template Sequence  GTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIW
Template Known Secondary structure  SS
TTSSS
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   263......270.........280.........290..
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Query Sequence  LLSAPLSFSFWQGALMVCGGSLLCWLATRR
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Template Sequence  AVVGSGAKEVMWSFVTLMVITAMYALNYNR
Template Known Secondary structure  SS
TTTS



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   401........410.........420.........430
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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