Job Description P46136 Confidence 0.62% Date Thu Jan 5 12:04:07 GMT 2012 Rank 75 Aligned Residues 230 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		A	T	L	I	G	L	I	A	I	V	L	W	S	T	M	V	G	L	I	R	G	V	S	E	G	L	G	P	V	G	G	A	A	A	I	Y	S	L	S	G	L	L	L	I	F	T	V	G	F	P	R	I	R	Q	I	P	.	.	K	G	Y	L	L	A	G	S	L	L	F	V	S	Y	E	I	C	L	A	L	S	L
Query Conservation																																																										.	.
Alig confidence															.																																											.	.
Template Conservation															.
Template Sequence		T	F	V	Y	A	P	F	A	H	W	L	W	G	.	G	G	W	L	A	K	L	G	A	L	D	F	A	G	G	M	V	V	H	I	S	S	G	F	A	A	L	A	V	A	M	T	I	G	K	R	A	G	F	E	E	Y	S	I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F
Template Known Secondary structure				T										S	.	S						T	T				S	S		T	T	T	T																			T	T	T	T	T	S					S
Template Predicted Secondary structure															.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		84			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		G	.	.	Y	A	A	T	H	H	Q	A	I	E	V	G	M	V	N	Y	L	W	P	S	L	T	I	L	F	A	I	L	F	N	G	Q	K	T	N	W	L	I	V	P	G	L	L	L	A	L	V	G	V	C	W	V	L	G	G	D	N	G	L	H	Y	D	E	I	I	N	N	I	T	T	S	P	L	S	Y	F	L
Query Conservation			.	.
Alig confidence			.	.																																																															.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	.	.	.	.	.	K	G	A	I	V	I	G	L	V	A
Template Known Secondary structure				G	G	G	S	S	S	S																													S																			T	T	T	T	T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		A	F	I	G	A	F	I	W	A	A	Y	C	T	V	T	N	K	Y	A	R	G	F	N	G	I	T	V	F	V	L	L	T	G	A	S	L	W	V	Y	Y	F	L	T	.	.	.	.	.	P	Q	P	E	M	I	F	S	T	P	V	M	I	K	L	I	S	A	A	F	T	L	G	F	A	Y	A	A	W	N	V	G
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L
Template Known Secondary structure															T	T				T	T																											S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		237	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	H	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	V	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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