Return to main results Retrieve Phyre Job Id

Job DescriptionP46856
Confidence13.74%DateThu Jan 5 12:04:28 GMT 2012
Rank9Aligned Residues102
% Identity21%Templated2icga1
SCOP infoSMI1/KNR4-like SMI1/KNR4-like SMI1/KNR4-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10........ .20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 


..

























Query SS confidence 











. .

































































Query Sequence  INKLIKMMNDLD. . YPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLS
Query Conservation 
  

 


   ..

 
 

 
 

 


             
   


 
   



   
  














Alig confidence 











..













..................

































Template Conservation                       
   
  .................. 
  

  

  

 

   

       
 

 
Template Sequence  LEEVDRLITLSGITFHASGTGTPELIKI. . . . . . . . . . . . . . . . . . YQDALGNEFPETYKLFLEKYGTLTFNGVSFYGIS
Template Known Secondary structure 

S

B





..................T



TSSTT
B

Template Predicted Secondary structure 









..................











Template SS confidence 















































































   6...10.........20.........30... ......40.........50.........60.......
 
   85. ...90.........100.........110.........120.. .......130
Predicted Secondary structure 

...



















.
Query SS confidence 

. . .



































.







Query Sequence  IP. . . EPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSI. SIFTYDIK
Query Conservation 

...

 








  
 
 






  








.


 


 
Alig confidence 

...



















....











.







Template Conservation                 
         ....
   
 
   
 
  



  
Template Sequence  KRGLSAASIPDVKFATEQARTFGDI. . . . NKEXIXIKNSGYGSIFSIDTS
Template Known Secondary structure  TTGGG

STTBTSS....
TT
STT
Template Predicted Secondary structure 













....








Template SS confidence 

















































   68.70.........80.........90.. .......100.........110...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions