Job Description P46856 Confidence 4.84% Date Thu Jan 5 12:04:28 GMT 2012 Rank 45 Aligned Residues 48 % Identity 15% Template c2yynA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal sturcture of human bromodomain protein Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		M	T	K	T	Q	I	N	K	L	I	K	M	M	N	D	L	.	.	.	.	.	D	Y	P	F	E	A	P	L	K	E	S	F	I	E	S	I	I	Q	I	E	F	N	S	N	S	T	N	C	L	E	K	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		L	T	P	I	D	K	R	K	C	E	R	L	L	L	F	L	Y	C	H	E	M	S	L	A	F	Q	D	P	V	P	L	T	V	P	D	Y	Y	K	I	I	K	N	P	M	D	L	S	T	I	K	K	R	L
Template Known Secondary structure																			T	S	G	G	G	G	G	G	S	S				T	T	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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