Job Description P46856 Confidence 8.94% Date Thu Jan 5 12:04:28 GMT 2012 Rank 18 Aligned Residues 77 % Identity 22% Template c1w63P_ PDB info PDB header:endocytosis Chain: P: PDB Molecule:adaptor-related protein complex 1, mu 1 subunit; PDBTitle: ap1 clathrin adaptor core Resolution 4.0 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K	L	I	K	M	M	N	D	L	D	Y	P	F	E	A	P	L	K	E	S	F	I	E	S	I	I	Q	I	E	F	N	S	N	S	T	N	C	L	E	K	L	C	N	E	V	S	I	L	F	K	N	Q	P	D	Y	L	T	F	L	R	A	M	D	G	F	E	V	N	G	L	R	L	F	S	L	S	I	P
Query Conservation
Alig confidence																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	E	L	L	D	E	L	M	D	F	G	Y	P	Q	T	T	D	.	.	S	K	I	L	Q	E	F	I	T	Q	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	L	E	T
Template Known Secondary structure											S	S	S	S						.	.	S	T	T	T	T	T	T			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.																																												140	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	S	V	K	N	L	F	A	V	N	E	F	Y	R	N	N	D	D	F	I	N	P	D	L	Q	E	R	L	V	I	G	D	Y	S	I	S	I	F	T	Y	D	I	K	G	D
Query Conservation
Alig confidence								.	.	.																											.
Template Conservation								.	.	.																											.
Template Sequence		G	V	S	W	R	S	.	.	.	E	G	I	K	Y	R	K	N	E	V	F	L	D	V	I	E	A	V	N	L	L	V	S	A	N	G	.	N	V	L	R	S	E	I	V	G	S
Template Known Secondary structure					S	S		.	.	.	S	S				S	S																	T	T	T	.
Template Predicted Secondary structure								.	.	.																											.
Template SS confidence
		145	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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